PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028074396.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family FAR1
Protein Properties Length: 217aa    MW: 24988.5 Da    PI: 9.8955
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028074396.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR196.53e-3048135290
            FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 
                     fY++YA+++GF +r+++ ++s r+g++++r++vC+keg+r+ + ++ +++r++ra tr gCka+++vkkek+gkw+vt++++eHnH+l+
  XP_028074396.1  48 FYDAYATSLGFVMRVDAFRRSMRDGNVVWRRLVCNKEGFRKCRPRR-SENRKPRAITREGCKAMIVVKKEKTGKWVVTRFVKEHNHPLV 135
                     9*******************************************99.9***************************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 217 aa     Download sequence    
MDENPCASNG GEMIKSSNGK ELVINEGNSD REPYVGMEFE SEEAAKVFYD AYATSLGFVM  60
RVDAFRRSMR DGNVVWRRLV CNKEGFRKCR PRRSENRKPR AITREGCKAM IVVKKEKTGK  120
WVVTRFVKEH NHPLVVAPAN SRRSVLLLQT PDEKDVKIRE LTAELHRERK RSASIQEQLD  180
MVLKDMEEHS NNLSRNIDDI VQSVKQIESK RVVLSHS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G07500.11e-94FAR1 family protein