PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028074569.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 221aa MW: 25100.6 Da PI: 8.0163

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028074569.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	85.1	1.1e-26	80	170	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 +fY eYAk++GF++r+++ ++s +n i+ r+fvCs+eg+r+ ++ +++ +r+ tr gCka++++ ++ gkw+vtk++ eHnH+l+ XP_028074569.1 80 DFYYEYAKRTGFTIRTNRIRHSLKNMAIIGRDFVCSREGFRAAKHALrKDRVLPPRPITREGCKAMIRLAARDGGKWVVTKFVREHNHKLM 170 6***************************************9998823333449********************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 221 aa Download sequence
MVGSSGGHDL FEFDRGSDEE TFENFGDHEA REDELLHSCD SHGSLNERLI FVEPSSNGLN 60 GDNLEPFTGM NFLSLDDARD FYYEYAKRTG FTIRTNRIRH SLKNMAIIGR DFVCSREGFR 120 AAKHALRKDR VLPPRPITRE GCKAMIRLAA RDGGKWVVTK FVREHNHKLM TNCKFPGELP 180 IVNILSEVIL LICCVLKVWS GSPWQGFCNY KGVAKNVKCN L

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G59470.2	1e-28	FAR1 family protein