PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028074619.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family FAR1
Protein Properties Length: 191aa    MW: 22139.3 Da    PI: 7.9719
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028074619.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR153.67.3e-172811190
            FAR1 11 GFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90
                     Fs+r ++ +k+k +++i++r++vC+keg+ + +k++   ++ +r+etrtgC+ +l vk++  +gk++v++++++ nHel+
  XP_028074619.1  2 RFSIRSEYCEKNKFTKQIISRNLVCNKEGFWKVDKRD-PLTKIPRVETRTGCETRLFVKLDVsSGKFVVIDFKEKYNHELV 81
                    7********************************9999.99999******************99****************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 191 aa     Download sequence    
MRFSIRSEYC EKNKFTKQII SRNLVCNKEG FWKVDKRDPL TKIPRVETRT GCETRLFVKL  60
DVSSGKFVVI DFKEKYNHEL VSLDCAHMLP SQRKISSTQA IELDSASKSG LRLGQSFELM  120
GREVDNEKQI TNMFWADEQM IMDYAQFGDV VTFDTTYKLN KEHRPFASFV GFNHHREAVV  180
FGAALLYDET A
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.12e-32FAR1 family protein