PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028074804.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family SBP
Protein Properties Length: 151aa    MW: 17197.8 Da    PI: 6.1674
Description SBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028074804.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SBP129.21.5e-4067143278
                     -SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS
             SBP   2 CqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 
                     Cqv++C++d++ a+ yhrrhkvCe+h+k +v++v+gl+qrfCqqCsrfhelsefDe+krsCrrrL +hnerrrk+++
  XP_028074804.1  67 CQVDNCTTDMTYARPYHRRHKVCEFHAKLAVAVVAGLRQRFCQQCSRFHELSEFDETKRSCRRRLIGHNERRRKSSH 143
                     **************************************************************************976 PP
Sequence ? help Back to Top
Protein Sequence    Length: 151 aa     Download sequence    
METGKAGGEK SVKDKMKGEV VEEEEEEEED EDEDEDDVGL GSGEDDKKKK EYNKKGSSRG  60
GSTLPSCQVD NCTTDMTYAR PYHRRHKVCE FHAKLAVAVV AGLRQRFCQQ CSRFHELSEF  120
DETKRSCRRR LIGHNERRRK SSHDTHGEGS S
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G15270.16e-43SBP family protein