PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028074818.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family bHLH
Protein Properties Length: 354aa    MW: 40218.1 Da    PI: 5.2615
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028074818.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH31.33.6e-10186229654
                     HHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
             HLH   6 nerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 
                      ++ErrRR+r+N+++  Lr+++Pk +      K++  +iL  ++ Y+k+L
  XP_028074818.1 186 LMAERRRRKRVNDRLLMLRSIVPKiS------KMDRTSILGDTIGYMKEL 229
                     589*********************66......***************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 354 aa     Download sequence    
MQLHTIKHHP THTHTHTQMD FTQHGLLDEL LSPERDTNWT NFPTGENDFF SNGWMFESFD  60
HESQVFFSSP NPNPNPNPNP PFLGVTSPTD LNELYPFFDG FTEPPELDSS SYHYNHGTTH  120
SSMVEDGDYG FVGLTNDHSL EQTINCCKVE IQMESTVDNI TQSNIVLCGE KKNRVKKAER  180
QPSKNLMAER RRRKRVNDRL LMLRSIVPKI SKMDRTSILG DTIGYMKELL EKVKTLQEED  240
DTQASMNQVN LMDSCKELKP NEPLVRNSPK FNVERTNTET RIEIRCAAKP GLLLSTVNSL  300
ESLGINVQQC VISCFNDFSM QGSCSEGLEQ QMVISSEDIK QALYRNAGYG GLCL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G65640.12e-77bHLH family protein