PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028074929.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

MYB

Protein Properties

Length: 208aa MW: 23656.2 Da PI: 6.0254

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028074929.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	55.3	1.6e-17	16	63	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT eEd +l+++++ +G g W+t ar g++Rt+k+c++rw++yl XP_028074929.1 16 KGPWTMEEDMILINYIATHGDGVWNTLARSAGLKRTGKSCRLRWLNYL 63 79********************************************97 PP
2	Myb_DNA-binding	52.9	8.5e-17	69	112	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+ T+eE+ l+ ++++++G++ W++Ia++++ gRt++++k++w++ XP_028074929.1 69 RGNITPEEQVLIMELHAMWGNR-WSKIAKHLP-GRTDNEIKNYWRT 112 7999****************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 208 aa Download sequence
MDKRPCDSGG DAEVRKGPWT MEEDMILINY IATHGDGVWN TLARSAGLKR TGKSCRLRWL 60 NYLRPDVRRG NITPEEQVLI MELHAMWGNR WSKIAKHLPG RTDNEIKNYW RTRIQKHMNK 120 QGDHQTLSGG QSSEADHNMD QASTSQAMPG PHDADHQHRD AADQIYSPPS YPENLDTFSA 180 PFPTESSNDN VWSMDDLWSL QLLNGDGD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G40350.1	1e-82	MYB family protein