PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028074977.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

E2F/DP

Protein Properties

Length: 464aa MW: 51137.1 Da PI: 4.704

Description

E2F/DP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028074977.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	E2F_TDP	86.3	2.3e-27	143	208	1	71
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneirwkg 71 r+++sL+llt+kf++l++++e+gi++ln++a++L +v ++RRiYDi+NVLe+++liekk kn+irwkg XP_028074977.1 143 RYDSSLGLLTKKFINLIKHAEDGILDLNNAADTL---EV--QKRRIYDITNVLEGIGLIEKKLKNRIRWKG 208 6899****************************...99..**************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 464 aa Download sequence
MSGAQASKSP AAAAAAVVPM KRHLLFSSMK PPFVPHEDYH RFSSSSRETH RVDADQVAEA 60 IVVKSPQLKR KSATDHNEVV SSDWTSSPGC TNIANSPLRT PVSGKGGRVY GRSKASKSNR 120 SGPQTPLSNS GCPSPLTPAG NCRYDSSLGL LTKKFINLIK HAEDGILDLN NAADTLEVQK 180 RRIYDITNVL EGIGLIEKKL KNRIRWKGLD ALRPGEVDDD ITMLQAEVEK LSMEERRLDD 240 RIREMQERLR DLSEDENNQK WLFVTEEDIK GLPCFQNETL IAIKAPHGTT LEVPDPDEAV 300 DYPQRRYRII LRSTMGPIDV YLVSQFEEKF EEMNGGEPSM NFPIASSSGS NENPATETTT 360 GSIGVEIEPR AQDGHGLSSD LNVSQDYAGG IMKIVPSDID NDADYWLLSD ADVSITDMWK 420 TDAVVEWDGV DILHEEFGMA DTGTPRPQTP LSGVADADVN ITQR

Sequence ? help Back to Top

Protein Sequence Length: 464 aa Download sequence

MSGAQASKSP AAAAAAVVPM KRHLLFSSMK PPFVPHEDYH RFSSSSRETH RVDADQVAEA  60
IVVKSPQLKR KSATDHNEVV SSDWTSSPGC TNIANSPLRT PVSGKGGRVY GRSKASKSNR  120
SGPQTPLSNS GCPSPLTPAG NCRYDSSLGL LTKKFINLIK HAEDGILDLN NAADTLEVQK  180
RRIYDITNVL EGIGLIEKKL KNRIRWKGLD ALRPGEVDDD ITMLQAEVEK LSMEERRLDD  240
RIREMQERLR DLSEDENNQK WLFVTEEDIK GLPCFQNETL IAIKAPHGTT LEVPDPDEAV  300
DYPQRRYRII LRSTMGPIDV YLVSQFEEKF EEMNGGEPSM NFPIASSSGS NENPATETTT  360
GSIGVEIEPR AQDGHGLSSD LNVSQDYAGG IMKIVPSDID NDADYWLLSD ADVSITDMWK  420
TDAVVEWDGV DILHEEFGMA DTGTPRPQTP LSGVADADVN ITQR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G36010.1	1e-174	E2F/DP family protein