PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028075243.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family TCP
Protein Properties Length: 194aa    MW: 21708.1 Da    PI: 5.3528
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028075243.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP89.28.8e-286316617109
             TCP  17 gRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec...eaesssssasnsssg...........kaaksaaks 97 
                     +RdRRvRls+++a++f+dLqd+LG+d++sktieWLl+ a ++i+el + ++s +      ++e++ss++ +   +             +++++++
  XP_028075243.1  63 LRDRRVRLSVTTAIQFYDLQDRLGYDQPSKTIEWLLKVAAKSIDELSSINTSFPDTPqqlSDEKRSSAGTE---QgfdsadlelggGDQTFHHQK 154
                     7*********************************************9994444422222233333333332...123466677776555555544 PP

             TCP  98 kksqksaasaln 109
                     +++q+++   l+
  XP_028075243.1 155 HQQQQQQYVSLS 166
                     444444443333 PP
Sequence ? help Back to Top
Protein Sequence    Length: 194 aa     Download sequence    
MEVDEIQTQG HKFPRIGNGR GDCNKIGQKG EERYPDDEED GEIKRSGGGG IEIGGGGGQQ  60
GLLRDRRVRL SVTTAIQFYD LQDRLGYDQP SKTIEWLLKV AAKSIDELSS INTSFPDTPQ  120
QLSDEKRSSA GTEQGFDSAD LELGGGDQTF HHQKHQQQQQ QYVSLSRARE RRLLACLVIS  180
WVLFCWWIIS GAVR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G18390.13e-22TCP family protein