PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028075340.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family M-type_MADS
Protein Properties Length: 121aa    MW: 13540.8 Da    PI: 10.493
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028075340.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF40.43.9e-131850840
                    HHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE CS
          SRF-TF  8 nrqvtfskRrngilKKAeELSvLCdaevaviif 40
                    n q +f kRr  ++KKA+ELS+ C++evav+++
  XP_028075340.1 18 NSQLSFLKRRFSLFKKANELSTHCGIEVAVMLV 50
                    7899**************************876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 121 aa     Download sequence    
MENKNKGGKK SKLVRLNNSQ LSFLKRRFSL FKKANELSTH CGIEVAVMLV LQRNPSVDEL  60
RLGTARKNEA LFGASIEELS LEQLKELKAK LMEVREKVTN KLVELLKEAN GGGGFEIAHG  120
F
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60440.14e-08M-type_MADS family protein