PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028075354.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family FAR1
Protein Properties Length: 316aa    MW: 37184.5 Da    PI: 8.3377
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028075354.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR173.64.1e-2329117189
            FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHel 89 
                     +fYneY++ vGFs+++++++ksk++g +++ +fvC keg++e++k+     ++++ etrt+C+a + ++ ++  +kw+++k++ +HnH l
  XP_028075354.1  29 EFYNEYGRIVGFSIKRDYHTKSKKDGIMINIKFVCCKEGEKEKDKRY-IIVKHPQHETRTKCNAFVYISFRRdLSKWVLMKFDDNHNHLL 117
                     6*******************************************999.89999****************999899*************87 PP
Sequence ? help Back to Top
Protein Sequence    Length: 316 aa     Download sequence    
MEDSALKELA KNSMLCVRME FDSKEAAYEF YNEYGRIVGF SIKRDYHTKS KKDGIMINIK  60
FVCCKEGEKE KDKRYIIVKH PQHETRTKCN AFVYISFRRD LSKWVLMKFD DNHNHLLHIP  120
QCTHIIPSQR KLCNAQGINV DVADDTGISL KASHDLINAL ARGKKFVEFT REDQKTYLRA  180
KRQRNLQYGE AGRLLRYFQQ QAIENPYFYF AFQLDVDEMI TNIFWVDHQM ITDYGIFGDV  240
VSFDTTFRTN KEYNPLALFT GFNYFRMTVI FGAALLYDET TTSFEWLFET FLHAMSRKKP  300
VSFFTDQDQA MAKAIS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.13e-59FAR1 family protein