PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028075461.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

CAMTA

Protein Properties

Length: 943aa MW: 106525 Da PI: 7.1328

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028075461.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	161.1	2.1e-50	41	157	3	118
CG-1 3 ke.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqr 96 +e k+rwl+++ei+aiL n++ +++ ++ t pksg+++L++rk++r+frkDG++wkkkkdgktv+E+he+LKvg e +++yYah+e+ ptf r XP_028075461.1 41 EEaKARWLRPNEIHAILCNYKYFSVYVKPVTLPKSGTIVLFDRKMLRNFRKDGHNWKKKKDGKTVKEAHEHLKVGDEERIHVYYAHGEDYPTFVR 135 45599**************************************************************************************** PP CG-1 97 rcywlLeeelekivlvhylevk 118 rcywlL+++le++vlvhy+e++ XP_028075461.1 136 RCYWLLDKALEHVVLVHYRETQ 157 *****************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 943 aa Download sequence
MIGLSVLRSS QMESAVPGRL AGSEIHGFHT MEDLDVGNIM EEAKARWLRP NEIHAILCNY 60 KYFSVYVKPV TLPKSGTIVL FDRKMLRNFR KDGHNWKKKK DGKTVKEAHE HLKVGDEERI 120 HVYYAHGEDY PTFVRRCYWL LDKALEHVVL VHYRETQEGS PVTPVDSNSS SGPSDPSASW 180 ILSEETNSAA DPAYYAVEKA QLESSDSMTL KNYERRLHEI NTLDWEELVV PDDPRKLSAP 240 DGDFLAGKTS CFEQQNQFGT NGFMSSGTIL SANNLPTGNS FVSQSETVDQ INSIHLNTSD 300 NLCFQRMEGQ TNSSFQKKDC QLMALDTGDS LDILGKDDLK TQDSFGRWMN SVMSDSPGSV 360 DDPTLVSSIS TGHESFTSPT MDHLQSSVPG QIFSITDVSP AWAFPTEETK ILITGFFHGG 420 HPQLAKSNIY IVCGDACSPA EIVQSGVFRC LVSSHAAGIV NLYLSFDGRN PISQVMTFEY 480 RTPLMHTSII SADEKSKWEE FRIQMRLAHL LFSTSRNLSI LSSKVSPNSL KEAKIFARKT 540 SQFADGWAHM MESFENNKIS FQQAKDSLFE LALKNRLHEW LLERVVEGHC KTSDYDDEGQ 600 GVIHLCAILD YTWAVYPFAQ SVLSLDYRDK FGWTALHWAA YCGREKMVAA LLSAGAKPNL 660 ITDPNSENPD GCIPADLASK KGYDGLAAYL AEKALVQHFK DMTIAGNVSG ALQISTPDSV 720 NVGNISEEEL YLKDTLTAYR TAADAATRIQ AAFRERSFKL QSKAVEVSNP ENEARNIIAA 780 MKIQHAFRNY ETRKKMAAAG RIQHRFRTWK IRKEFLNMRR QAIKIQAVFR GYQVRRQYQK 840 IVWSVGVLEK VILRWRLKRK GFRGLQVSPV EAMNNQKQES EVEEEFFRAS RKQAEERVER 900 SVVRVQAMFR SRRAQEEYHR MKLAHNEATL QYEGLASPDN NMG

Sequence ? help Back to Top

Protein Sequence Length: 943 aa Download sequence

MIGLSVLRSS QMESAVPGRL AGSEIHGFHT MEDLDVGNIM EEAKARWLRP NEIHAILCNY  60
KYFSVYVKPV TLPKSGTIVL FDRKMLRNFR KDGHNWKKKK DGKTVKEAHE HLKVGDEERI  120
HVYYAHGEDY PTFVRRCYWL LDKALEHVVL VHYRETQEGS PVTPVDSNSS SGPSDPSASW  180
ILSEETNSAA DPAYYAVEKA QLESSDSMTL KNYERRLHEI NTLDWEELVV PDDPRKLSAP  240
DGDFLAGKTS CFEQQNQFGT NGFMSSGTIL SANNLPTGNS FVSQSETVDQ INSIHLNTSD  300
NLCFQRMEGQ TNSSFQKKDC QLMALDTGDS LDILGKDDLK TQDSFGRWMN SVMSDSPGSV  360
DDPTLVSSIS TGHESFTSPT MDHLQSSVPG QIFSITDVSP AWAFPTEETK ILITGFFHGG  420
HPQLAKSNIY IVCGDACSPA EIVQSGVFRC LVSSHAAGIV NLYLSFDGRN PISQVMTFEY  480
RTPLMHTSII SADEKSKWEE FRIQMRLAHL LFSTSRNLSI LSSKVSPNSL KEAKIFARKT  540
SQFADGWAHM MESFENNKIS FQQAKDSLFE LALKNRLHEW LLERVVEGHC KTSDYDDEGQ  600
GVIHLCAILD YTWAVYPFAQ SVLSLDYRDK FGWTALHWAA YCGREKMVAA LLSAGAKPNL  660
ITDPNSENPD GCIPADLASK KGYDGLAAYL AEKALVQHFK DMTIAGNVSG ALQISTPDSV  720
NVGNISEEEL YLKDTLTAYR TAADAATRIQ AAFRERSFKL QSKAVEVSNP ENEARNIIAA  780
MKIQHAFRNY ETRKKMAAAG RIQHRFRTWK IRKEFLNMRR QAIKIQAVFR GYQVRRQYQK  840
IVWSVGVLEK VILRWRLKRK GFRGLQVSPV EAMNNQKQES EVEEEFFRAS RKQAEERVER  900
SVVRVQAMFR SRRAQEEYHR MKLAHNEATL QYEGLASPDN NMG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G16150.1	0.0	CAMTA family protein