PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028075468.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

CAMTA

Protein Properties

Length: 904aa MW: 102388 Da PI: 7.4053

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028075468.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	160.6	3e-50	3	118	3	118
CG-1 3 kekkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqrr 97 + k+rwl+++ei+aiL n++ +++ ++ t pksg+++L++rk++r+frkDG++wkkkkdgktv+E+he+LKvg e +++yYah+e+ ptf rr XP_028075468.1 3 EAKARWLRPNEIHAILCNYKYFSVYVKPVTLPKSGTIVLFDRKMLRNFRKDGHNWKKKKDGKTVKEAHEHLKVGDEERIHVYYAHGEDYPTFVRR 97 4599***************************************************************************************** PP CG-1 98 cywlLeeelekivlvhylevk 118 cywlL+++le++vlvhy+e++ XP_028075468.1 98 CYWLLDKALEHVVLVHYRETQ 118 ****************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 904 aa Download sequence
MEEAKARWLR PNEIHAILCN YKYFSVYVKP VTLPKSGTIV LFDRKMLRNF RKDGHNWKKK 60 KDGKTVKEAH EHLKVGDEER IHVYYAHGED YPTFVRRCYW LLDKALEHVV LVHYRETQEG 120 SPVTPVDSNS SSGPSDPSAS WILSEETNSA ADPAYYAVEK AQLESSDSMT LKNYERRLHE 180 INTLDWEELV VPDDPRKLSA PDGDFLAGKT SCFEQQNQFG TNGFMSSGTI LSANNLPTGN 240 SFVSQSETVD QINSIHLNTS DNLCFQRMEG QTNSSFQKKD CQLMALDTGD SLDILGKDDL 300 KTQDSFGRWM NSVMSDSPGS VDDPTLVSSI STGHESFTSP TMDHLQSSVP GQIFSITDVS 360 PAWAFPTEET KILITGFFHG GHPQLAKSNI YIVCGDACSP AEIVQSGVFR CLVSSHAAGI 420 VNLYLSFDGR NPISQVMTFE YRTPLMHTSI ISADEKSKWE EFRIQMRLAH LLFSTSRNLS 480 ILSSKVSPNS LKEAKIFARK TSQFADGWAH MMESFENNKI SFQQAKDSLF ELALKNRLHE 540 WLLERVVEGH CKTSDYDDEG QGVIHLCAIL DYTWAVYPFA QSVLSLDYRD KFGWTALHWA 600 AYCGREKMVA ALLSAGAKPN LITDPNSENP DGCIPADLAS KKGYDGLAAY LAEKALVQHF 660 KDMTIAGNVS GALQISTPDS VNVGNISEEE LYLKDTLTAY RTAADAATRI QAAFRERSFK 720 LQSKAVEVSN PENEARNIIA AMKIQHAFRN YETRKKMAAA GRIQHRFRTW KIRKEFLNMR 780 RQAIKIQAVF RGYQVRRQYQ KIVWSVGVLE KVILRWRLKR KGFRGLQVSP VEAMNNQKQE 840 SEVEEEFFRA SRKQAEERVE RSVVRVQAMF RSRRAQEEYH RMKLAHNEAT LQYEGLASPD 900 NNMG

Sequence ? help Back to Top

Protein Sequence Length: 904 aa Download sequence

MEEAKARWLR PNEIHAILCN YKYFSVYVKP VTLPKSGTIV LFDRKMLRNF RKDGHNWKKK  60
KDGKTVKEAH EHLKVGDEER IHVYYAHGED YPTFVRRCYW LLDKALEHVV LVHYRETQEG  120
SPVTPVDSNS SSGPSDPSAS WILSEETNSA ADPAYYAVEK AQLESSDSMT LKNYERRLHE  180
INTLDWEELV VPDDPRKLSA PDGDFLAGKT SCFEQQNQFG TNGFMSSGTI LSANNLPTGN  240
SFVSQSETVD QINSIHLNTS DNLCFQRMEG QTNSSFQKKD CQLMALDTGD SLDILGKDDL  300
KTQDSFGRWM NSVMSDSPGS VDDPTLVSSI STGHESFTSP TMDHLQSSVP GQIFSITDVS  360
PAWAFPTEET KILITGFFHG GHPQLAKSNI YIVCGDACSP AEIVQSGVFR CLVSSHAAGI  420
VNLYLSFDGR NPISQVMTFE YRTPLMHTSI ISADEKSKWE EFRIQMRLAH LLFSTSRNLS  480
ILSSKVSPNS LKEAKIFARK TSQFADGWAH MMESFENNKI SFQQAKDSLF ELALKNRLHE  540
WLLERVVEGH CKTSDYDDEG QGVIHLCAIL DYTWAVYPFA QSVLSLDYRD KFGWTALHWA  600
AYCGREKMVA ALLSAGAKPN LITDPNSENP DGCIPADLAS KKGYDGLAAY LAEKALVQHF  660
KDMTIAGNVS GALQISTPDS VNVGNISEEE LYLKDTLTAY RTAADAATRI QAAFRERSFK  720
LQSKAVEVSN PENEARNIIA AMKIQHAFRN YETRKKMAAA GRIQHRFRTW KIRKEFLNMR  780
RQAIKIQAVF RGYQVRRQYQ KIVWSVGVLE KVILRWRLKR KGFRGLQVSP VEAMNNQKQE  840
SEVEEEFFRA SRKQAEERVE RSVVRVQAMF RSRRAQEEYH RMKLAHNEAT LQYEGLASPD  900
NNMG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G16150.1	0.0	CAMTA family protein