PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028075469.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

HSF

Protein Properties

Length: 198aa MW: 23310.9 Da PI: 10.0049

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028075469.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	105.4	4.7e-33	25	117	2	103
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96 Flkk+++++ed++++ +isw+++ + fvv+d+++f++++LpkyFkh+nf+SF+RQL +YgFkk+++++ weF+++ F+ gkk+l ++ XP_028075469.1 25 FLKKTFHMVEDPDTDIIISWTASRKCFVVWDHRQFSTNLLPKYFKHNNFSSFIRQLYTYGFKKIDSDR---------WEFANEAFQGGKKHLFKN 110 9******************999*************************************999.........************** PP XXXXXXX CS HSF_DNA-bind 97 ikrkkse 103 ikr+k++ XP_028075469.1 111 IKRRKHN 117 **975 PP

Sequence ? help Back to Top
Protein Sequence Length: 198 aa Download sequence
MPCSPPISSA PKPMEGLHET GPSPFLKKTF HMVEDPDTDI IISWTASRKC FVVWDHRQFS 60 TNLLPKYFKH NNFSSFIRQL YTYGFKKIDS DRWEFANEAF QGGKKHLFKN IKRRKHNHQN 120 VQQQGVMRPC LNSANFGIET ELEKLRNDRM KMKMEIMKLK QQQENTESYL AVVKERIGYT 180 ECKQQDILIF MAKAFSNP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G26150.1	2e-78	HSF family protein