PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028075471.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family HSF
Protein Properties Length: 171aa    MW: 18614.8 Da    PI: 3.978
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028075471.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind69.76e-22100160262
                     HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTE CS
    HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgF 62 
                     Flkk+++++ed++++ +isw+++++s+vv+d+++f++++LpkyFkh+nf+SF+ QL +Y+ 
  XP_028075471.1 100 FLKKTFHMVEDPDTDIIISWTASQKSLVVWDHRQFSTNLLPKYFKHNNFSSFICQLYTYDA 160
                     9********************999***********************************85 PP
Sequence ? help Back to Top
Protein Sequence    Length: 171 aa     Download sequence    
METLKIKQEN IVVIDDDIPG GGGGGLFEEE EEEEEEETVK VVELNEEAVV LVDDDWVSGE  60
GVVLVGGGGG GGGDSMPCSP PISSAPKPMV GLHETGPSPF LKKTFHMVED PDTDIIISWT  120
ASQKSLVVWD HRQFSTNLLP KYFKHNNFSS FICQLYTYDA ASILSQTIIN N
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G26150.14e-31HSF family protein