PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028075552.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

bHLH

Protein Properties

Length: 489aa MW: 54437.3 Da PI: 6.5122

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028075552.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	40.1	6.5e-13	302	347	4	54
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 +h e+Er+RR+++N++f Lr+++P+ +++Ka+ L Av YIk+L XP_028075552.1 302 NHVEAERQRREKLNHRFYALRSVVPNV-----SRMDKASLLADAVAYIKEL 347 799*********************6.....4**************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 489 aa Download sequence
MDEIMSSSTL TPSLQQRLQL IIQSRSEWWV YAIFWQATKD SNDQLILSWA DGQFRGTKQF 60 VSKLASNGHD HHQHHHQSKS GFDLERRVQA LFRDNSDIDG LVEGDVTDPE WFYMGSVTKS 120 FVAGDDILGR TFSSAACVWL AGEHELKFYD CHRAKEAHLH KIQTLVCIST SCGVVELGSS 180 DIIKEDWELI QLVKSLFGSD DVTMVSKQPG GGSHVVGQIP FPNRNLSLLD FGVSGIQDDT 240 YEEKQMETNL NREMGITGRS SSDSGGPSDD FEGPLFSDSA INVHSKKRGR KPITTGRETP 300 INHVEAERQR REKLNHRFYA LRSVVPNVSR MDKASLLADA VAYIKELKAK TEELEAKLRV 360 HQQSQAVAVA AAAVPSRMCI TDVYDNQSTS ISVDHRSRSS SSSYGMAPAP AEVNVKILGS 420 EAVIRVQCLD VNYPPARLMD AIRSLEFSVH HASVSKVKEL VLQDIVVRVP DGLTSEEALR 480 TAILRRFQV

Sequence ? help Back to Top

Protein Sequence Length: 489 aa Download sequence

MDEIMSSSTL TPSLQQRLQL IIQSRSEWWV YAIFWQATKD SNDQLILSWA DGQFRGTKQF  60
VSKLASNGHD HHQHHHQSKS GFDLERRVQA LFRDNSDIDG LVEGDVTDPE WFYMGSVTKS  120
FVAGDDILGR TFSSAACVWL AGEHELKFYD CHRAKEAHLH KIQTLVCIST SCGVVELGSS  180
DIIKEDWELI QLVKSLFGSD DVTMVSKQPG GGSHVVGQIP FPNRNLSLLD FGVSGIQDDT  240
YEEKQMETNL NREMGITGRS SSDSGGPSDD FEGPLFSDSA INVHSKKRGR KPITTGRETP  300
INHVEAERQR REKLNHRFYA LRSVVPNVSR MDKASLLADA VAYIKELKAK TEELEAKLRV  360
HQQSQAVAVA AAAVPSRMCI TDVYDNQSTS ISVDHRSRSS SSSYGMAPAP AEVNVKILGS  420
EAVIRVQCLD VNYPPARLMD AIRSLEFSVH HASVSKVKEL VLQDIVVRVP DGLTSEEALR  480
TAILRRFQV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G17880.1	9e-72	bHLH family protein