PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028075595.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family bHLH
Protein Properties Length: 93aa    MW: 10525.8 Da    PI: 6.783
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028075595.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH253.5e-0822611554
                    HHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH 15 riNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                    +iN+ +++L++llP++ + +s  +s a +L++++++I+ L
  XP_028075595.1 22 QINELISKLQQLLPELRHRHSDNVSAARVLQETCDCIRGL 61
                    8**************76888888***************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 93 aa     Download sequence    
MSRQRSRSRQ SGGEASRISD EQINELISKL QQLLPELRHR HSDNVSAARV LQETCDCIRG  60
LHREVDDLSE RLSELLATTD SAQAAIIRSL LMQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G74500.13e-35bHLH family protein