PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028075694.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

NAC

Protein Properties

Length: 403aa MW: 45906.1 Da PI: 7.2304

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028075694.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	170.5	5.4e-53	8	137	1	129
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvka...eekewyfFskrdkkyatgkrknratksgyWkatgkdkev 92 +ppGfrFhPtdeel+++yLkkkv+ +k+++ evi+evd++k+ePwdL++++k ++ewyfFs++d+ky+tg+r+nrat+ g+Wkatg+dk + XP_028075694.1 8 VPPGFRFHPTDEELLHYYLKKKVTFQKFDM-EVIREVDLNKIEPWDLQERCKIgstPQNEWYFFSHKDRKYPTGSRTNRATNVGFWKATGRDKCI 101 69**************************.99**********964444222455********************************** PP NAM 93 lskkgelvglkktLvfykgrapkgektdWvmheyrle 129 + + +++g++ktLvfy+grap+g+ktdW+mheyrle XP_028075694.1 102 RN-SFKKIGMRKTLVFYRGRAPHGQKTDWIMHEYRLE 137 9.8899***************************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 403 aa Download sequence
MASSSGGVPP GFRFHPTDEE LLHYYLKKKV TFQKFDMEVI REVDLNKIEP WDLQERCKIG 60 STPQNEWYFF SHKDRKYPTG SRTNRATNVG FWKATGRDKC IRNSFKKIGM RKTLVFYRGR 120 APHGQKTDWI MHEYRLEDGD DSQDSPSEDG WVVCRVFKKK NLFKIGNEGG GGANSISIAP 180 DQLNNDSNAP NQIQPRTFFT HRHSRDDLYL LHQQQQQQQQ HTHVHGSQQT FDLYKSELAL 240 NYSHNPIHIP ISVPYPSHHH LQAQNFIPPP THKSMGYVDY STLPSDSPIM LKQLMSNPRD 300 CESGGSENLQ YQASEPGLEV GTCEGSSQNM IAVAGPGRDD NLNEWGLMLD RLVTTTPHLG 360 HDEGSSKGVR FEDANASSSS SMHHQMNQQL PLRGEMDFWG YGK

Sequence ? help Back to Top

Protein Sequence Length: 403 aa Download sequence

MASSSGGVPP GFRFHPTDEE LLHYYLKKKV TFQKFDMEVI REVDLNKIEP WDLQERCKIG  60
STPQNEWYFF SHKDRKYPTG SRTNRATNVG FWKATGRDKC IRNSFKKIGM RKTLVFYRGR  120
APHGQKTDWI MHEYRLEDGD DSQDSPSEDG WVVCRVFKKK NLFKIGNEGG GGANSISIAP  180
DQLNNDSNAP NQIQPRTFFT HRHSRDDLYL LHQQQQQQQQ HTHVHGSQQT FDLYKSELAL  240
NYSHNPIHIP ISVPYPSHHH LQAQNFIPPP THKSMGYVDY STLPSDSPIM LKQLMSNPRD  300
CESGGSENLQ YQASEPGLEV GTCEGSSQNM IAVAGPGRDD NLNEWGLMLD RLVTTTPHLG  360
HDEGSSKGVR FEDANASSSS SMHHQMNQQL PLRGEMDFWG YGK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G10350.1	1e-142	NAC family protein