PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028075725.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family NF-YB
Protein Properties Length: 124aa    MW: 13820.5 Da    PI: 5.2456
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028075725.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB128.81.9e-401821798
           NF-YB 17 mkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrelegekk 98
                    mkk+ P+n+ki kdak+tvqe vsefisf+t+e sdkcq+ekrktingddll a+atlGfedy+++lkv+l++yreleg++k
  XP_028075725.1  1 MKKASPSNGKIPKDAKDTVQEYVSEFISFITNEVSDKCQKEKRKTINGDDLLCAMATLGFEDYIASLKVFLARYRELEGDTK 82
                    9******************************************************************************975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 124 aa     Download sequence    
MKKASPSNGK IPKDAKDTVQ EYVSEFISFI TNEVSDKCQK EKRKTINGDD LLCAMATLGF  60
EDYIASLKVF LARYRELEGD TKGSASEGDR SSKRDIVVAQ IDPNALFAHQ QSFTQGMNYL  120
NSEV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G53340.13e-52NF-YB family protein