PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028075787.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family AP2
Protein Properties Length: 130aa    MW: 15055.1 Da    PI: 10.0192
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028075787.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP248.42.3e-154090355
             AP2  3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgt.aeeAakaaiaarkkleg 55
                    y+GV+++++ grW A+I  +     +k f+lg+f    eeAaka++ a+ k++g
  XP_028075787.1 40 YRGVTRHHQHGRWQARIGRVAG---NKDFYLGTFSDtQEEAAKAYDIAAIKFHG 90
                    9***************988532...5********776**************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 130 aa     Download sequence    
MVKLENYQQE LEHMKNMTRQ EYVAHLRRKS SGFSRGASMY RGVTRHHQHG RWQARIGRVA  60
GNKDFYLGTF SDTQEEAAKA YDIAAIKFHG VSAITNFDLM GIVNSMYPEQ LTRLSCELQL  120
FMSSRRAYSL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37750.11e-54AP2 family protein