PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028075818.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

Nin-like

Protein Properties

Length: 759aa MW: 85891.6 Da PI: 7.6883

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028075818.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	54.6	2.1e-17	566	613	4	51
RWP-RK 4 eisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiks 51 +i ed+ + ++ dAAk+ +v+ ++LKriCR yGI+RWP Rki++ XP_028075818.1 566 KIPKEDILQTSGMSTDDAAKKFNVSKSTLKRICRGYGIERWPPRKINK 613 57789999999***********************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 759 aa Download sequence
MRGRDRKTII WLRGNFILVY RKIGVHRASV YNLIGMERED LPHDFKEYVD TELNWLPLKC 60 VDKVVGGVFW SRGDDKPLRP RPTVPADINL ELKKKIRDVL YSILQHWLDY AILVQFWAPI 120 TEERQSFLTT QNQPFALVSA YVYNVVKFLV PDPLDVLGLC QYRMISKYNK FVVDLDGESS 180 EEHFGLPGRV FKNQFPESTP NVEWYSIKEY SQRNDALRCG VKQSLAFPVF EPSTQRCVGV 240 LEVVTQTGQS TYSCLLWNNY FGNYFGNQIY EEFEVVGLKS SVALEHKCME LDVDKNEARK 300 IALDEMKNVL KIVCEDHDLP LVQIWIPCRI GWPCRDLVDG GILGVSCQNI KYEYYSEFRM 360 VNNVHRIKEG TGVVGRALLS TNLVFCRDVT QLSITEYPMA HYARDVGLSG CFAICLQSSC 420 TGNDDYVLEI FMPVSNRASE NPPPSLWGIL ETVRINFRTF RAASGVELGK ELCIERIDFQ 480 NGGKLDLVQM PQTIISLPLL EPLQCGGEIT QVDSSNQQLL NAINNGSSVV NVVGTEGNNT 540 AWTSPQEKGT VKTSERKGNK PGVKIKIPKE DILQTSGMST DDAAKKFNVS KSTLKRICRG 600 YGIERWPPRK INKAGCSQLY ESASCLSSDH LPSTQSAASI VHTEPHDTMM QDANLVTIKV 660 KYAEDNAILF HLSLSSSLTK LQQEVAKRLN LETGSYNVKY KDEVGDSILI ACDVDLQYYM 720 GHSRSLGRSP IVVLLEQKLP IPDHQKKKKE RKKKLPITH

Sequence ? help Back to Top

Protein Sequence Length: 759 aa Download sequence

MRGRDRKTII WLRGNFILVY RKIGVHRASV YNLIGMERED LPHDFKEYVD TELNWLPLKC  60
VDKVVGGVFW SRGDDKPLRP RPTVPADINL ELKKKIRDVL YSILQHWLDY AILVQFWAPI  120
TEERQSFLTT QNQPFALVSA YVYNVVKFLV PDPLDVLGLC QYRMISKYNK FVVDLDGESS  180
EEHFGLPGRV FKNQFPESTP NVEWYSIKEY SQRNDALRCG VKQSLAFPVF EPSTQRCVGV  240
LEVVTQTGQS TYSCLLWNNY FGNYFGNQIY EEFEVVGLKS SVALEHKCME LDVDKNEARK  300
IALDEMKNVL KIVCEDHDLP LVQIWIPCRI GWPCRDLVDG GILGVSCQNI KYEYYSEFRM  360
VNNVHRIKEG TGVVGRALLS TNLVFCRDVT QLSITEYPMA HYARDVGLSG CFAICLQSSC  420
TGNDDYVLEI FMPVSNRASE NPPPSLWGIL ETVRINFRTF RAASGVELGK ELCIERIDFQ  480
NGGKLDLVQM PQTIISLPLL EPLQCGGEIT QVDSSNQQLL NAINNGSSVV NVVGTEGNNT  540
AWTSPQEKGT VKTSERKGNK PGVKIKIPKE DILQTSGMST DDAAKKFNVS KSTLKRICRG  600
YGIERWPPRK INKAGCSQLY ESASCLSSDH LPSTQSAASI VHTEPHDTMM QDANLVTIKV  660
KYAEDNAILF HLSLSSSLTK LQQEVAKRLN LETGSYNVKY KDEVGDSILI ACDVDLQYYM  720
GHSRSLGRSP IVVLLEQKLP IPDHQKKKKE RKKKLPITH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G64530.1	8e-80	Nin-like family protein