PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028075856.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family MYB
Protein Properties Length: 249aa    MW: 28926.8 Da    PI: 7.0339
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028075856.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding537.9e-17956148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g+WT++Ed +lv +v+++G ++W++Ia+  g++Rt+k+c++rw +yl
   XP_028075856.1  9 KGPWTEQEDVQLVFYVNLFGDRRWDSIAKVSGLKRTGKSCRLRWVNYL 56
                     79********************************************97 PP
2Myb_DNA-binding45.81.4e-1462107148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                      r ++T+ E+ l +++  ++G++ W++Ia++++ gRt++++k++w++++
   XP_028075856.1  62 RSKMTPLEERLVLELQSKWGNR-WSRIAHKLP-GRTDNEIKNYWRTHM 107
                      6899******************.*********.************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 249 aa     Download sequence    
MVKEEEIRKG PWTEQEDVQL VFYVNLFGDR RWDSIAKVSG LKRTGKSCRL RWVNYLHPGL  60
KRSKMTPLEE RLVLELQSKW GNRWSRIAHK LPGRTDNEIK NYWRTHMRKK AQERKRAMSP  120
PSNSSSSVSN NPPVDSMPFV ETKERSFYDT GGDHHQMLTP KGINKGFEEG ESTETGYSMD  180
DIWEDIALSE SNTMKTVCET IMASPIWNYC PPPPDMLWMM EENKESKMFP AITDPFFACY  240
DQESSNLTG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G46130.16e-76MYB family protein