PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028076004.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

NAC

Protein Properties

Length: 345aa MW: 40553.4 Da PI: 7.1173

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028076004.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	78	2.2e-24	7	131	3	128
NAM 3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk...kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevls 94 G++F P d+elv +yL++k++g++l+++ ++++++y+ ++L k k+++++k +y+F++ +kk+ +gkr r + +g+Wk + k++++ XP_028076004.1 7 IGYKFIPMDKELVLHYLRAKAKGQPLPVKGLVNKCNLYDD--QELSKifsKMRTKSKLYYYFTELKKKNGKGKRIDRLAGKGTWKGLDRGKPIHD 99 7*************************999999975..56653334787888888****************9************ PP NAM 95 kkgelvglkktLvfykgrapkgektdWvmheyrl 128 ++g+l+g k+++ + + ++++e++ W m+ey+l XP_028076004.1 100 NEGRLTGRKRSFDYIN--RESSEQSVWDMKEYSL 131 ***********4..444569******98 PP

Sequence ? help Back to Top
Protein Sequence Length: 345 aa Download sequence
MAAKITIGYK FIPMDKELVL HYLRAKAKGQ PLPVKGLVNK CNLYDDQELS KIFSKMRTKS 60 KLYYYFTELK KKNGKGKRID RLAGKGTWKG LDRGKPIHDN EGRLTGRKRS FDYINRESSE 120 QSVWDMKEYS LEGVSLEDDQ LIKNNFQDMQ SVNRTAFPKQ TDMTAIQDAS RYYYHRPTPW 180 DILYEEDFFH GQNSYHGKTI HEWNIDGYSE YQIFECILKG WWDNVLTFNQ QHEILNATKT 240 ETNPTSNTVT QREDAVYALV QTILYHFIGS TTVNDDRSRE LLQNLRYPSL THFHCIDYMK 300 EQFLQTISGD DTSMKSVTSS QDHEDPDQDE NEFAVFSWRI TSTRR

Sequence ? help Back to Top

Protein Sequence Length: 345 aa Download sequence

MAAKITIGYK FIPMDKELVL HYLRAKAKGQ PLPVKGLVNK CNLYDDQELS KIFSKMRTKS  60
KLYYYFTELK KKNGKGKRID RLAGKGTWKG LDRGKPIHDN EGRLTGRKRS FDYINRESSE  120
QSVWDMKEYS LEGVSLEDDQ LIKNNFQDMQ SVNRTAFPKQ TDMTAIQDAS RYYYHRPTPW  180
DILYEEDFFH GQNSYHGKTI HEWNIDGYSE YQIFECILKG WWDNVLTFNQ QHEILNATKT  240
ETNPTSNTVT QREDAVYALV QTILYHFIGS TTVNDDRSRE LLQNLRYPSL THFHCIDYMK  300
EQFLQTISGD DTSMKSVTSS QDHEDPDQDE NEFAVFSWRI TSTRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G10480.1	7e-14	NAC family protein