PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028076108.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

CAMTA

Protein Properties

Length: 1060aa MW: 118647 Da PI: 6.2947

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028076108.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	140.7	4.3e-44	7	89	36	118
CG-1 36 sgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqrrcywlLeeelekivlvhylevk 118 gsl+L++rk++ryfrkDG++w+kkkdgktv+E+he+LK g+v+vl+cyYah+een++fqrr+ywlLeeel++ivlvhy+evk XP_028076108.1 7 GGSLFLFDRKVLRYFRKDGHNWRKKKDGKTVKEAHERLKAGSVDVLHCYYAHGEENESFQRRSYWLLEEELSHIVLVHYREVK 89 69******************************************************************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 1060 aa Download sequence
KLCPFSGGSL FLFDRKVLRY FRKDGHNWRK KKDGKTVKEA HERLKAGSVD VLHCYYAHGE 60 ENESFQRRSY WLLEEELSHI VLVHYREVKG NRANFNRIKE AEEAIPNSQE SEEIIPNSEV 120 DSSVSSTFNP YSYQVTSQTA DTMSLNSTQA SEYEDAESVY NHQASSGYHS FLELQPCVTE 180 KMDDGVSAPY YPVPFSHDYQ GKLPAIPGMD FAPLALGDKG KNNANVALTY EHQKHLDFPS 240 WEDVLENSGR GIQSVPFQPS ISSNEPDSIG VNPGQANEIR GLILRDGFVK KQEVGIYPHR 300 QVEWQTSEGD SSHVSKWSMD QKSYQDSEYR LTTGLHGGVN CVDLLKSSGP CQTHPAQNKH 360 YAQNDLPIQR TYTEGGSALK SELERNLTVE GKAEQLPLKQ PLLNGFVREG LKKLDSFDRW 420 MSKELGDVNE SHVHSSSGTY WETVETEDGV DDSSISPQVH LDTYMLGPSL SQDQFFSIID 480 FSPNWAYAGS EIKVLITGKF LKIQQDVEKC KWSCMFGEVE VPAEVIADGV LRCIAPLHKA 540 GRVPFYVTCS NRLACSEVRE FEYRVNNIQD VDVPDIYCGT MNEILLRMRF GKLLSVESAS 600 SPSSISSTLG ENSHLNSKIS SLLKEDNNEW EQMLKLTSED EFSLEKVKEQ LLQKLLKEKL 660 HVWLLQKVAE GGKGPSVLDE EGQGVLHFAA ALGYDWAIRP TLAAGVSVNF RDVNGWTALH 720 WAASCGRERT VAFLISLDAA PGALTDPTPI FPSGQPPADL ASSKGHKGIA GYLAESSLSS 780 HLSSLKLKNS SGGDAVQTVS ERTATPISDG DLSHGLSLSL KDSLAAVCNA TQAAARIHQV 840 FRVQSFQRKQ LKEYGDNKFG MSDECALSLV TVKTSRLGQH DEPVHAAAIR IQNKFRSWKG 900 RKEFLTIRQQ IVKIQAHVRG HQVRKNHRKI TWSVGILEKV ILRWRRKGSG LRGFKQETLT 960 QGSSKQDTSS KEDDYDVLKE GRKQTEQRLE KALARVKSMV QYPEARDQYR RLLNVVSEMQ 1020 ETKAVYGKVL NSTEEIADFD DMIDLEAFLD DDTYMPTSSS

Sequence ? help Back to Top

Protein Sequence Length: 1060 aa Download sequence

KLCPFSGGSL FLFDRKVLRY FRKDGHNWRK KKDGKTVKEA HERLKAGSVD VLHCYYAHGE  60
ENESFQRRSY WLLEEELSHI VLVHYREVKG NRANFNRIKE AEEAIPNSQE SEEIIPNSEV  120
DSSVSSTFNP YSYQVTSQTA DTMSLNSTQA SEYEDAESVY NHQASSGYHS FLELQPCVTE  180
KMDDGVSAPY YPVPFSHDYQ GKLPAIPGMD FAPLALGDKG KNNANVALTY EHQKHLDFPS  240
WEDVLENSGR GIQSVPFQPS ISSNEPDSIG VNPGQANEIR GLILRDGFVK KQEVGIYPHR  300
QVEWQTSEGD SSHVSKWSMD QKSYQDSEYR LTTGLHGGVN CVDLLKSSGP CQTHPAQNKH  360
YAQNDLPIQR TYTEGGSALK SELERNLTVE GKAEQLPLKQ PLLNGFVREG LKKLDSFDRW  420
MSKELGDVNE SHVHSSSGTY WETVETEDGV DDSSISPQVH LDTYMLGPSL SQDQFFSIID  480
FSPNWAYAGS EIKVLITGKF LKIQQDVEKC KWSCMFGEVE VPAEVIADGV LRCIAPLHKA  540
GRVPFYVTCS NRLACSEVRE FEYRVNNIQD VDVPDIYCGT MNEILLRMRF GKLLSVESAS  600
SPSSISSTLG ENSHLNSKIS SLLKEDNNEW EQMLKLTSED EFSLEKVKEQ LLQKLLKEKL  660
HVWLLQKVAE GGKGPSVLDE EGQGVLHFAA ALGYDWAIRP TLAAGVSVNF RDVNGWTALH  720
WAASCGRERT VAFLISLDAA PGALTDPTPI FPSGQPPADL ASSKGHKGIA GYLAESSLSS  780
HLSSLKLKNS SGGDAVQTVS ERTATPISDG DLSHGLSLSL KDSLAAVCNA TQAAARIHQV  840
FRVQSFQRKQ LKEYGDNKFG MSDECALSLV TVKTSRLGQH DEPVHAAAIR IQNKFRSWKG  900
RKEFLTIRQQ IVKIQAHVRG HQVRKNHRKI TWSVGILEKV ILRWRRKGSG LRGFKQETLT  960
QGSSKQDTSS KEDDYDVLKE GRKQTEQRLE KALARVKSMV QYPEARDQYR RLLNVVSEMQ  1020
ETKAVYGKVL NSTEEIADFD DMIDLEAFLD DDTYMPTSSS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G22300.2	0.0	CAMTA family protein