PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028076184.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 783aa MW: 89467.2 Da PI: 6.8953

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028076184.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	79.2	7.4e-25	25	114	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 +fYn+Y ++GFs+r+++ kk+k +++i++r++vC+keg+ + +k++ ++++raetrtgC+a+l vk++ +gk++v++++++HnHel+ XP_028076184.1 25 DFYNAYEGRMGFSIRREYCKKNKLTKQIISRNLVCNKEGFWKVDKRD-PLTKTPRAETRTGCEARLFVKLDVnNGKFVVIDFKEKHNHELV 114 6****************************************9999.9999***************99**************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 783 aa Download sequence
MEPDNDCGWK PKVGMTFDSE ESAYDFYNAY EGRMGFSIRR EYCKKNKLTK QIISRNLVCN 60 KEGFWKVDKR DPLTKTPRAE TRTGCEARLF VKLDVNNGKF VVIDFKEKHN HELVSLDCAH 120 MLPSQRKISD TQAIELDLAS ESGLHLGQSF ELMGREAGGR HSLDNEEQIT NMFWADAQMV 180 MDYAQFGDVV IFDTTYKLNK EHRLFASFVG FNHHRETVVF GAALLYDETA ETFVWLFQTF 240 LEAMSKKAPK TLFTDQNAAM AKAIPIVMPD TSHRLCTWHL MQNALRDGNC LFQDKGVKGV 300 LNRFMFDIED ENEWEMKWGE MLDTYDAHDN HWLKLIFGVK EKWGWPYVRS TWAAGMSITQ 360 LSESFNAFLK DYIRSDFNLN EFFMHFERVL CEKRYKELEA GYALCQRLPR MRAPFIMLSQ 420 MGNVYTKNIF EEFQDEYFLS VESDIQAIEY IDGCSLYTVV DAIGKNARKV KMEMDGSLAC 480 SCSKFERKGI LCSHCLKVMR EILKLKEILS QYIMKRWTKQ ARGEAVTDKL GNEIQVDVKF 540 KQASRYKTLM TAFRSIACRA TETEESYDFC CSQVAALGAH VESMISAHFC PEKKVSINDQ 600 PQTCEQEDNN HEDNNHVVQI PIGLKKKHPT SKGKKRIKSP CELALQASIK KKSCAQFLSS 660 SRPVTTPTVR PSPLSIGGDL SIHENVTPLH PPLAPPHPPH SVAMGGTIPP PLIYPTYNAN 720 NLAYCRQPTF MTLLQGGYDI GFEDSQGSQT GSRPTNNLLL HTEGLDGHEE LEGTSTFMHR 780 RCL

Sequence ? help Back to Top

Protein Sequence Length: 783 aa Download sequence

MEPDNDCGWK PKVGMTFDSE ESAYDFYNAY EGRMGFSIRR EYCKKNKLTK QIISRNLVCN  60
KEGFWKVDKR DPLTKTPRAE TRTGCEARLF VKLDVNNGKF VVIDFKEKHN HELVSLDCAH  120
MLPSQRKISD TQAIELDLAS ESGLHLGQSF ELMGREAGGR HSLDNEEQIT NMFWADAQMV  180
MDYAQFGDVV IFDTTYKLNK EHRLFASFVG FNHHRETVVF GAALLYDETA ETFVWLFQTF  240
LEAMSKKAPK TLFTDQNAAM AKAIPIVMPD TSHRLCTWHL MQNALRDGNC LFQDKGVKGV  300
LNRFMFDIED ENEWEMKWGE MLDTYDAHDN HWLKLIFGVK EKWGWPYVRS TWAAGMSITQ  360
LSESFNAFLK DYIRSDFNLN EFFMHFERVL CEKRYKELEA GYALCQRLPR MRAPFIMLSQ  420
MGNVYTKNIF EEFQDEYFLS VESDIQAIEY IDGCSLYTVV DAIGKNARKV KMEMDGSLAC  480
SCSKFERKGI LCSHCLKVMR EILKLKEILS QYIMKRWTKQ ARGEAVTDKL GNEIQVDVKF  540
KQASRYKTLM TAFRSIACRA TETEESYDFC CSQVAALGAH VESMISAHFC PEKKVSINDQ  600
PQTCEQEDNN HEDNNHVVQI PIGLKKKHPT SKGKKRIKSP CELALQASIK KKSCAQFLSS  660
SRPVTTPTVR PSPLSIGGDL SIHENVTPLH PPLAPPHPPH SVAMGGTIPP PLIYPTYNAN  720
NLAYCRQPTF MTLLQGGYDI GFEDSQGSQT GSRPTNNLLL HTEGLDGHEE LEGTSTFMHR  780
RCL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-92	FAR1 family protein