PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028076210.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family bHLH
Protein Properties Length: 286aa    MW: 30929 Da    PI: 6.524
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028076210.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH309.2e-10135179554
                     HHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
             HLH   5 hnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 
                     h+++Er RR+ri +++  L+el+P+ +      K + a++L + v+Y+k L
  XP_028076210.1 135 HSIAERLRRERIAERIRALQELVPNvN------KTDRAAMLDEIVDYVKFL 179
                     99***********************55......****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 286 aa     Download sequence    
MANNNPSENS TDDFLEQILG FQTYASADTH LAPNDATLAA TPPPMMLQLS SGGGFHRPVF  60
PLGLSLDQGK PGFMNEASGS SKRFLEDVVD GRSSSSSVKN AFPGQPMPST VAAVPHPPAI  120
RPRVRARRGQ ATDPHSIAER LRRERIAERI RALQELVPNV NKTDRAAMLD EIVDYVKFLR  180
LQVKVLSMSR LGGAAAVAPL VTDIPISSLE EEAGEGGRNQ PTWEKWSNDG TERQVAKLME  240
ENVGAAMQFL QSKALCIMPI SLASAIYHTQ PPEATTVVKS EAHPPS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1140145RLRRER
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G02590.21e-103bHLH family protein