PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028076403.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family FAR1
Protein Properties Length: 310aa    MW: 35909.9 Da    PI: 7.4695
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028076403.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR181.31.7e-2531119190
            FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 
                     +fYn+Y+ ++GFs+r+ + +ks ++g+it+r+fvC+keg+r  +k++ + ++++r+e rtgC+a+l++k +k  +k+ v++++++HnH ++
  XP_028076403.1  31 DFYNTYGGRLGFSIRRGYVNKS-KEGQITSRQFVCNKEGFRVVDKRD-SLTKNPRQEVRTGCQARLVIKWDKnMQKFFVSDFVEQHNHIFV 119
                     6********************9.6666****************9999.99*******************999899*************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 310 aa     Download sequence    
MGPNNVENDR GDCDWKPRVR MTFDTEQEAY DFYNTYGGRL GFSIRRGYVN KSKEGQITSR  60
QFVCNKEGFR VVDKRDSLTK NPRQEVRTGC QARLVIKWDK NMQKFFVSDF VEQHNHIFVP  120
TECTHMLPSQ RKISASQAIE IDLAEKSGIR LNAAFELMGN EVGGRESHGE TVIFGAALMY  180
DETADSFVWL FRRFLETMSS KAPKTIFTDQ DAVMAKAIPI VMPNTTHCLC TWNLMQNALR  240
HANSIFKDKA VKDKGMKSVL STFMYDIEDE EEFTLKWEEM LDKCEVKDNH WLKLTFGVKE  300
KWGLPYVRNT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.13e-24FAR1 family protein