PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028076470.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family FAR1
Protein Properties Length: 361aa    MW: 41112.1 Da    PI: 8.0662
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028076470.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR1301.8e-0963985490
            FAR1 54 traetrtgCkaklkvkkekdgkwevtkleleHnHela 90
                     r etrtgCka +++  e dg w+vt ++ eHnH+la
  XP_028076470.1 63 ARLETRTGCKAFIRLIVE-DGIWRVTAFNPEHNHKLA 98
                    7889***********999.****************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 361 aa     Download sequence    
MGLQGLMLAS EIKSRKRLSV GESNDDNQLK NFDIKSSSSP DIFSEINTYS DAERSEHNCM  60
FVARLETRTG CKAFIRLIVE DGIWRVTAFN PEHNHKLALQ SERHLLRSAC HISKLKAGVI  120
DSIVNAGLRS LELDEDFRCK QGAPQKIVKK SGSLGHAAQV YTCKIFKLFE NEFLNSLAMV  180
EKQVDCQDTI DVFELKEENS ERVHIVHFDH LTNNISCSCK KFESLGVLCC HALRVFSIKN  240
LTTIPNQYIS KRWKKDAKKG IMAYEQGANS IANGKEVEII WRNSMIRIAI YKSQGNDSLK  300
NICQKILTEL DEKIEREFAR LKLGTDDMDF ANIPFTTMLQ NVNVVNQFSE KNDSHTEKLQ  360
K
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G27110.23e-18FAR1 family protein