PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028076475.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family NF-YB
Protein Properties Length: 223aa    MW: 24959 Da    PI: 6.42
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028076475.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB173.62.1e-5457153197
           NF-YB   1 vreqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyreleg 95 
                     vreqdrf+Pianv+rim+k+lP++akis+daket+qecvsefisf+t+ea+++cq+e+rkti+++d+lwa+++lGf+dy+epl++yl+ yre+eg
  XP_028076475.1  57 VREQDRFMPIANVIRIMRKILPSHAKISDDAKETIQECVSEFISFITGEANERCQKEQRKTITAEDVLWAMSKLGFDDYIEPLTLYLNGYREFEG 151
                     69********************************************************************************************* PP

           NF-YB  96 ek 97 
                     ++
  XP_028076475.1 152 DR 153
                     97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 223 aa     Download sequence    
MEMELGGNGG FHGYRRPPQT SSGMKLDMKL PEINNNNNNN NYYYHRSATT DDNECTVREQ  60
DRFMPIANVI RIMRKILPSH AKISDDAKET IQECVSEFIS FITGEANERC QKEQRKTITA  120
EDVLWAMSKL GFDDYIEPLT LYLNGYREFE GDRGSLRGEP LTMVKRPGEL GGLAFAPAPF  180
HLSHHHGFFG SAAAMGGFFK DASNAGSSQA AMASVEHYVQ AHK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G47670.12e-70NF-YB family protein