PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028076478.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

MYB_related

Protein Properties

Length: 546aa MW: 61869.7 Da PI: 7.1585

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028076478.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	44.6	3.3e-14	107	148	4	46
S-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 4 WTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 W ++E+ ll+++++++G+g+W+ Ia+++g +++++qc+ ++++ XP_028076478.1 107 WNADEEILLLEGIEMYGMGNWAEIAEHVG-TKSREQCIQHYNT 148 ***************************.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 546 aa Download sequence
MGRSRPNFHA DEDPSQRSRR KKNASSGENL ESTAAGQGTG DGKRALYHCN YCNKDITGKI 60 RIKCFMCPDF DLCIECFSVG AEVTPHKSNH PYRVMDNLSF PLICPDWNAD EEILLLEGIE 120 MYGMGNWAEI AEHVGTKSRE QCIQHYNTAY MNSPYFPLPD MTHVVGKNRK ELLAMAKGLG 180 EDKKGLSSLG ELTLKEESPF SPSRIKVEDS HKNGSSGRLL SSLNAGTTAI KKASTIAQVK 240 NSPNPIKVED HDNRSFGGKK PKPSKDEGPS LIELSGYNSK RQEFDPEYDN EAEQLLAEMD 300 FKEADTEEER ELKLRVLRIY SKRLDERQRR KEFILERNLL HPNPFEKDLS PEEKELCRRY 360 DVFMRFHSKE EHDDLLKTVV QEHRIMKRIQ ELKEARTAGC RSSDEAKRYF EQKRKRDAEE 420 SARSAKDSTR AGPSSQAGIS VPTSTESVGK DSNSRSTGQA NSTSLSELDI MAFPGADLLS 480 ESEKRLCCEL RLPPPDYHKM QEIMTIQIIS GSITKKSDAY PFFNKIEPSK VDRIYDMLVK 540 KGFAQS

Sequence ? help Back to Top

Protein Sequence Length: 546 aa Download sequence

MGRSRPNFHA DEDPSQRSRR KKNASSGENL ESTAAGQGTG DGKRALYHCN YCNKDITGKI  60
RIKCFMCPDF DLCIECFSVG AEVTPHKSNH PYRVMDNLSF PLICPDWNAD EEILLLEGIE  120
MYGMGNWAEI AEHVGTKSRE QCIQHYNTAY MNSPYFPLPD MTHVVGKNRK ELLAMAKGLG  180
EDKKGLSSLG ELTLKEESPF SPSRIKVEDS HKNGSSGRLL SSLNAGTTAI KKASTIAQVK  240
NSPNPIKVED HDNRSFGGKK PKPSKDEGPS LIELSGYNSK RQEFDPEYDN EAEQLLAEMD  300
FKEADTEEER ELKLRVLRIY SKRLDERQRR KEFILERNLL HPNPFEKDLS PEEKELCRRY  360
DVFMRFHSKE EHDDLLKTVV QEHRIMKRIQ ELKEARTAGC RSSDEAKRYF EQKRKRDAEE  420
SARSAKDSTR AGPSSQAGIS VPTSTESVGK DSNSRSTGQA NSTSLSELDI MAFPGADLLS  480
ESEKRLCCEL RLPPPDYHKM QEIMTIQIIS GSITKKSDAY PFFNKIEPSK VDRIYDMLVK  540
KGFAQS