PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028076479.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

MYB_related

Protein Properties

Length: 481aa MW: 54656.7 Da PI: 6.2653

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028076479.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	44.8	2.8e-14	42	83	4	46
S-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 4 WTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 W ++E+ ll+++++++G+g+W+ Ia+++g +++++qc+ ++++ XP_028076479.1 42 WNADEEILLLEGIEMYGMGNWAEIAEHVG-TKSREQCIQHYNT 83 ***************************.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 481 aa Download sequence
MCPDFDLCIE CFSVGAEVTP HKSNHPYRVM DNLSFPLICP DWNADEEILL LEGIEMYGMG 60 NWAEIAEHVG TKSREQCIQH YNTAYMNSPY FPLPDMTHVV GKNRKELLAM AKGLGEDKKG 120 LSSLGELTLK EESPFSPSRI KVEDSHKNGS SGRLLSSLNA GTTAIKKAST IAQVKNSPNP 180 IKVEDHDNRS FGGKKPKPSK DEGPSLIELS GYNSKRQEFD PEYDNEAEQL LAEMDFKEAD 240 TEEERELKLR VLRIYSKRLD ERQRRKEFIL ERNLLHPNPF EKDLSPEEKE LCRRYDVFMR 300 FHSKEEHDDL LKTVVQEHRI MKRIQELKEA RTAGCRSSDE AKRYFEQKRK RDAEESARSA 360 KDSTRAGPSS QAGISVPTST ESVGKDSNSR STGQANSTSL SELDIMAFPG ADLLSESEKR 420 LCCELRLPPP DYHKMQEIMT IQIISGSITK KSDAYPFFNK IEPSKVDRIY DMLVKKGFAQ 480 S

Sequence ? help Back to Top

Protein Sequence Length: 481 aa Download sequence

MCPDFDLCIE CFSVGAEVTP HKSNHPYRVM DNLSFPLICP DWNADEEILL LEGIEMYGMG  60
NWAEIAEHVG TKSREQCIQH YNTAYMNSPY FPLPDMTHVV GKNRKELLAM AKGLGEDKKG  120
LSSLGELTLK EESPFSPSRI KVEDSHKNGS SGRLLSSLNA GTTAIKKAST IAQVKNSPNP  180
IKVEDHDNRS FGGKKPKPSK DEGPSLIELS GYNSKRQEFD PEYDNEAEQL LAEMDFKEAD  240
TEEERELKLR VLRIYSKRLD ERQRRKEFIL ERNLLHPNPF EKDLSPEEKE LCRRYDVFMR  300
FHSKEEHDDL LKTVVQEHRI MKRIQELKEA RTAGCRSSDE AKRYFEQKRK RDAEESARSA  360
KDSTRAGPSS QAGISVPTST ESVGKDSNSR STGQANSTSL SELDIMAFPG ADLLSESEKR  420
LCCELRLPPP DYHKMQEIMT IQIISGSITK KSDAYPFFNK IEPSKVDRIY DMLVKKGFAQ  480
S