PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028076785.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 322aa MW: 37027.7 Da PI: 7.0849

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028076785.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	75.4	1.1e-23	63	152	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 +fYn+Y+ +vGFs+rks+ +k+k+ +eit rtfvC+keg+r +k++ + +++e r+gC a++ +k+++ gk++ ++++++HnH+l+ XP_028076785.1 63 DFYNNYGGKVGFSIRKSYAHKNKQPKEITLRTFVCYKEGSRGIDKQD-PLVKFSSQEVRCGCGAQMSIKLDRnLGKYVTIDFVEHHNHDLV 152 6****************************************9999.8888999************989*************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 322 aa Download sequence
MAEGGDDGHG EGRRMAEGRD GTTRRYCGHD EVMEENNVVD ELGSCGWKLK LGMPLNSEQS 60 AYDFYNNYGG KVGFSIRKSY AHKNKQPKEI TLRTFVCYKE GSRGIDKQDP LVKFSSQEVR 120 CGCGAQMSIK LDRNLGKYVT IDFVEHHNHD LVHQECIHML SSQRKISTTQ AIEVELPLES 180 RIPLRSAYEL LGRESSGRAS LGFTKLDQKN YLRSKRQKDL EYGETGSVLQ YFRKKTVENP 240 SFYYAVQLDC KEQITNIFWT DAQMIMDYAQ FGDIVTFDTT YKLNNEHRPF GIFVGFNHHR 300 ETVIFGATLM YDKTAESFTW LF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-58	FAR1 family protein