PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028077007.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

G2-like

Protein Properties

Length: 308aa MW: 34968 Da PI: 9.3109

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028077007.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	96.2	2.4e-30	84	137	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 prlrWtp+LH rFv+ave+LGG+++AtPk +l+lm++kgL + +vkSHLQ+YR+ XP_028077007.1 84 PRLRWTPDLHLRFVHAVERLGGHDRATPKLVLQLMNMKGLHIGQVKSHLQMYRS 137 8****************************************************7 PP
2	Myb_DNA-binding	49.6	9.3e-16	85	136	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT+++++++v+av++lGg+ t+k++ + m+ kg+ q+ks++q+y+ XP_028077007.1 85 RLRWTPDLHLRFVHAVERLGGHdraTPKLVLQLMNmKGLHIGQVKSHLQMYR 136 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 308 aa Download sequence
MIEELPTKPS SAILILSYSV NISKMVGGGS IQCSKISPSD QNNDGNNSDE DNPKDGRSSS 60 NSTVEENEKK SSVPVRPYVR SKMPRLRWTP DLHLRFVHAV ERLGGHDRAT PKLVLQLMNM 120 KGLHIGQVKS HLQMYRSKKN DDPGQVIADH RNSFNLSQLP MLQGFNKKHH SNFRYGDASW 180 SGHDKWIRLI GLSRNDNGRP GFYGTFAERI FGNSHNSLVN SNLHMNITFP SSNEQSIRRN 240 NELKQEFPHF LNPEMRLQEQ TSVKRKASDC DLDLNLSLRQ TFRNDESQKG MEDDEEGSNL 300 TLSLYSST

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G38300.1	2e-53	G2-like family protein