PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028077049.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 560aa MW: 64998.4 Da PI: 8.5353

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028077049.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	71.1	2.5e-22	25	114	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 +fYn+Y+ ++G s+r + +k+k +++ ++r +vC+keg+r+ +k++ + ++++ra+trtgCka+l vk+++ +gk++vt+++++Hn +l+ XP_028077049.1 25 DFYNTYGGRMGSSIRSDFCRKNKFTNQLICRLLVCNKEGFRKGDKRD-RLSKNPRAKTRTGCKARLYVKLDEgTGKYVVTNFKEKHNRDLV 114 6*****************************************999.999**********************************9986 PP

Sequence ? help Back to Top
Protein Sequence Length: 560 aa Download sequence
MEPENDCAWK PKQGMTFDSE KCVYDFYNTY GGRMGSSIRS DFCRKNKFTN QLICRLLVCN 60 KEGFRKGDKR DRLSKNPRAK TRTGCKARLY VKLDEGTGKY VVTNFKEKHN RDLVSPECAH 120 MLPSQRNIST AQAIELDLAA QSGLRLGQSF ELMGREAGGR QCLGFTKLDQ KNYLRTKRQQ 180 SLAYGEVGNV LQYFKEKSLQ NPSFFYAFQL DNEEQITNMF WDDSQMIMDY AQFGDVVTFD 240 TTYKLNKEHR PFSSFVGFNH HRETVIFGAV LLYDETAESF VWLFQNFLEA MSGKAPKTLF 300 TDQDAAMAKA KPIVMPDRSH RLCTWYLMQN ALKHVNCLFQ DKGVNGVLNK FFFDIEDANQ 360 WKLEWAEMFD KYDAHENHWL KLTFAVKKKW GWPYVRSTWA AGMILYEKRY KELEAGYALC 420 QRLPKVKATI RMLIQKGNVY TKKIFEEFQN EYFRSIESDI EAIEYGEAST IYTVVDVGNK 480 HARKVKIERD GSLGCNCTKF EREGILCCHS LKVIRDILKI KEVPPHIEDV AMTEDENGMQ 540 SEVIPSQIVK QTHVGLLHKF

Sequence ? help Back to Top

Protein Sequence Length: 560 aa Download sequence

MEPENDCAWK PKQGMTFDSE KCVYDFYNTY GGRMGSSIRS DFCRKNKFTN QLICRLLVCN  60
KEGFRKGDKR DRLSKNPRAK TRTGCKARLY VKLDEGTGKY VVTNFKEKHN RDLVSPECAH  120
MLPSQRNIST AQAIELDLAA QSGLRLGQSF ELMGREAGGR QCLGFTKLDQ KNYLRTKRQQ  180
SLAYGEVGNV LQYFKEKSLQ NPSFFYAFQL DNEEQITNMF WDDSQMIMDY AQFGDVVTFD  240
TTYKLNKEHR PFSSFVGFNH HRETVIFGAV LLYDETAESF VWLFQNFLEA MSGKAPKTLF  300
TDQDAAMAKA KPIVMPDRSH RLCTWYLMQN ALKHVNCLFQ DKGVNGVLNK FFFDIEDANQ  360
WKLEWAEMFD KYDAHENHWL KLTFAVKKKW GWPYVRSTWA AGMILYEKRY KELEAGYALC  420
QRLPKVKATI RMLIQKGNVY TKKIFEEFQN EYFRSIESDI EAIEYGEAST IYTVVDVGNK  480
HARKVKIERD GSLGCNCTKF EREGILCCHS LKVIRDILKI KEVPPHIEDV AMTEDENGMQ  540
SEVIPSQIVK QTHVGLLHKF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	3e-95	FAR1 family protein