PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028077063.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family SBP
Protein Properties Length: 143aa    MW: 16312.9 Da    PI: 7.4361
Description SBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028077063.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SBP132.51.4e-4158134177
                     --SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S-- CS
             SBP   1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkq 77 
                     +Cqv++C++d++ a++yhrrhkvCe+h+kap+v v+gl+qrfCqqCsrfhelsefDe+k+sCrrrLa+hnerrrk++
  XP_028077063.1  58 CCQVDNCTTDMTYARSYHRRHKVCEFHAKAPAVDVAGLHQRFCQQCSRFHELSEFDETKKSCRRRLAGHNERRRKSS 134
                     6**************************************************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 143 aa     Download sequence    
METIKAGGKR RMKEVEGDEE EEEEDEDVVE LDSGEDNKKM KGPSGRKGSS SGGSRQRCCQ  60
VDNCTTDMTY ARSYHRRHKV CEFHAKAPAV DVAGLHQRFC QQCSRFHELS EFDETKKSCR  120
RRLAGHNERR RKSSYESYGE GSG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G33810.14e-41SBP family protein