PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028077126.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 403aa MW: 46141.1 Da PI: 6.5098

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028077126.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	77.9	1.9e-24	64	154	1	91
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHelap 91 +fYn+Y++++GFs+rk++ +k+k+++eit+rtfvC+keg+r +k++ +++r+e r+gC a++ +k+++ +gk+ +++++HnH+l+p XP_028077126.1 64 DFYNTYGEKLGFSIRKAYANKNKHTKEITSRTFVCYKEGSRGIDKRD-PLVKNPRQEVRCGCGARFSIKLDRiSGKYLACDFVEHHNHDLVP 154 6*****************************************999.9999***********************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 403 aa Download sequence
MAEMEEQRNG EQRTVGDGES GGDAMVGRRH CGDSEVMEES NIVDDCGWKP KVGMPFDSEQ 60 AAYDFYNTYG EKLGFSIRKA YANKNKHTKE ITSRTFVCYK EGSRGIDKRD PLVKNPRQEV 120 RCGCGARFSI KLDRISGKYL ACDFVEHHNH DLVPQDCIHM LPFQRKISTT QAIEVELASQ 180 SGIPLRSAYE LFGRESGGRA SLGFTKLDQK NYLRSKRQKD LEYGEAGSVL HYFRKKIVEN 240 PSFFYAVQLD CDKQISNIFW ADAQMIMDYA QFGDVVTFDT TYKLNNEHRP FGSFVGFNHH 300 RETVIFGAAL MYDETAESFT WLFQIFLEAM SNKAPKTIFT DQDAAMAKAI AIVMPDTNHR 360 LCTWHLMQNA VKHVSSVFDD VRVKAVFSKF MHDIDDEEQF RIQ

Sequence ? help Back to Top

Protein Sequence Length: 403 aa Download sequence

MAEMEEQRNG EQRTVGDGES GGDAMVGRRH CGDSEVMEES NIVDDCGWKP KVGMPFDSEQ  60
AAYDFYNTYG EKLGFSIRKA YANKNKHTKE ITSRTFVCYK EGSRGIDKRD PLVKNPRQEV  120
RCGCGARFSI KLDRISGKYL ACDFVEHHNH DLVPQDCIHM LPFQRKISTT QAIEVELASQ  180
SGIPLRSAYE LFGRESGGRA SLGFTKLDQK NYLRSKRQKD LEYGEAGSVL HYFRKKIVEN  240
PSFFYAVQLD CDKQISNIFW ADAQMIMDYA QFGDVVTFDT TYKLNNEHRP FGSFVGFNHH  300
RETVIFGAAL MYDETAESFT WLFQIFLEAM SNKAPKTIFT DQDAAMAKAI AIVMPDTNHR  360
LCTWHLMQNA VKHVSSVFDD VRVKAVFSKF MHDIDDEEQF RIQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-87	FAR1 family protein