PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028077256.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family HD-ZIP
Protein Properties Length: 180aa    MW: 20380.5 Da    PI: 9.1253
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028077256.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox51.41.8e-161770356
                    --SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
        Homeobox  3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
                    ++ ++t++q++ Le+ F +++++  e++ +L ++lg++ rq+ +W+qN+Ra++k
  XP_028077256.1 17 NKKRLTQDQVRLLETSFSSSKKLEPERKLRLVQELGIPPRQIAIWYQNKRARWK 70
                    56789************************************************9 PP
2HD-ZIP_I/II104.96.5e-3417108293
     HD-ZIP_I/II   2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 
                     +k+rl+++qv+lLE+sF++++kLeperK +l +eLg+ prq+a+W+qn+RAR+k+++lE dy +L+ ++ +  +e++rLekeve+L +el+e
  XP_028077256.1  17 NKKRLTQDQVRLLETSFSSSKKLEPERKLRLVQELGIPPRQIAIWYQNKRARWKAQKLELDYGTLQLRLGTALAEKRRLEKEVERLGRELEE 108
                     79************************************************************************************999976 PP
Sequence ? help Back to Top
Protein Sequence    Length: 180 aa     Download sequence    
MNLMNSQNQK HQSSKHNKKR LTQDQVRLLE TSFSSSKKLE PERKLRLVQE LGIPPRQIAI  60
WYQNKRARWK AQKLELDYGT LQLRLGTALA EKRRLEKEVE RLGRELEEAH MVLLSLKQPP  120
PKSSPPLPPP PPPPPPVSCL SSCSSLHEGH VSCCCWVNNE ALQLEELYAC LTGADGSNCA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G53980.12e-24HD-ZIP family protein