PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028077380.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

ERF

Protein Properties

Length: 237aa MW: 26983.2 Da PI: 5.7895

Description

ERF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028077380.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	67.1	3.3e-21	89	139	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 ++++GVr+++ +grW+AeIrdp r kr++lg+f+t+eeAak +++a+ +l+g XP_028077380.1 89 KKFRGVRQRP-WGRWAAEIRDP---A-RkKRVWLGTFDTPEEAAKVYDRAAVNLKG 139 59******.******8...2.35********************99988 PP

Sequence ? help Back to Top
Protein Sequence Length: 237 aa Download sequence
MSANPVTKFS ERPGNFPTTF RWKVVRIILA DPDATDNSSD DDDDAKVVKR HVKEIHFNQS 60 IHSVPKPQQR KRRKLRSFGS PESDTSRRKK FRGVRQRPWG RWAAEIRDPA RKKRVWLGTF 120 DTPEEAAKVY DRAAVNLKGP DAVTNFPKVD VTEAVVDDVK KDGEGLQKVE ASSPKSVLCY 180 EELTPFDGFS YGDVDVFGFD IDLPLCLPHP SVLENYYGED DLGEFDFEFA DFLVEGR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	70	76	RKRRKLR
2	70	90	RKRRKLRSFGSPESDTSRRKK
3	71	91	RKRRKLRSFGSPESDTSRRKK
4	72	92	RKRRKLRSFGSPESDTSRRKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G11140.1	2e-29	ERF family protein