PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028077395.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family NAC
Protein Properties Length: 109aa    MW: 12509.6 Da    PI: 10.3236
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028077395.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM63.18.9e-20161061105
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 
                     lp GfrFhPtdeelvv+yL++k+++ +l++ +vi+++d               ++++ yfF+kr+kk+ +  + + +t sgyWka gk+k ++s 
  XP_028077395.1  16 LPIGFRFHPTDEELVVHYLNRKIHSFPLPA-SVIPDLDGS-----------GDSKEKRYFFCKRSKKNVN--KCKGITGSGYWKAMGKEKYIISP 96 
                     699************************999.889886543...........3345678*******99865..556699****************9 PP

             NAM  96 kgelvglkkt 105
                     ++++v   k+
  XP_028077395.1  97 GSNQVVRVKI 106
                     7777655544 PP
Sequence ? help Back to Top
Protein Sequence    Length: 109 aa     Download sequence    
MEKENLVRND GMMMKLPIGF RFHPTDEELV VHYLNRKIHS FPLPASVIPD LDGSGDSKEK  60
RYFFCKRSKK NVNKCKGITG SGYWKAMGKE KYIISPGSNQ VVRVKIFLS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G13180.15e-29NAC family protein