PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028077676.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 285aa MW: 33033.4 Da PI: 6.5089

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028077676.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	80.7	2.5e-25	35	124	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 +fYn+Y+ ++ Fs+r+++ +k k +++ ++r +vC+keg+r+ +k++ ++++raetrtgC+a+l +k+++ +gk++vt+++++HnH+l+ XP_028077676.1 35 DFYNTYGGRMRFSIRRDYCRKDKFTNQLICRLLVCNKEGFRKVDKRD-PLSKNPRAETRTGCEARLYIKLDEgTGKFVVTDFKEKHNHDLV 124 6*****************************************999.999************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 285 aa Download sequence
MGFQLHFDID TEPENDCEWK PKQGMTFESE QCAYDFYNTY GGRMRFSIRR DYCRKDKFTN 60 QLICRLLVCN KEGFRKVDKR DPLSKNPRAE TRTGCEARLY IKLDEGTGKF VVTDFKEKHN 120 HDLVSPKCAH MLSSQRKIST TQAMQLDLAA QSGLRLGQSF ELMGREAGGR QYNEEQITNM 180 FWADAQMIMD YAQFGDVVTF DTTDKLNKEH RPFASFVGFN HHRETIIFGA ALLYDETDES 240 FVWLFENFLE VRSRKAPKTL FIDQDAGMAK AIPIVMPDTS HQLCT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-53	FAR1 family protein