PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028077783.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family FAR1
Protein Properties Length: 248aa    MW: 28147.5 Da    PI: 7.7921
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028077783.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR179.36.9e-2582172191
            FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHelap 91 
                     +fYn+Y+ +vGFs++k++++k+k+++eit++tfvC+keg+r  +k++    + +r+e r++C a++ +k ++ +gk+ v++++++HnH+l+p
  XP_028077783.1  82 DFYNNYGGKVGFSIKKAYEHKNKQTKEITSQTFVCYKEGTRGIDKRN-PLVKFPRQEVRCDCGARFSIKVDRnSGKYIVIDIVEHHNHDLVP 172
                     6*******************************************999.88999****************9999****************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 248 aa     Download sequence    
MVEGCDDDDK GRRMTKGHDG NGEGRRMVKG RDATAKGRDA TTRGDYDHDE VMEENNVIDE  60
LASCGWKLKL CMSFDSEQAT YDFYNNYGGK VGFSIKKAYE HKNKQTKEIT SQTFVCYKEG  120
TRGIDKRNPL VKFPRQEVRC DCGARFSIKV DRNSGKYIVI DIVEHHNHDL VPQECIHMLP  180
SQRKISTTQA IEVELASESG IPLRSAYELF GRESGGRASI GFTKLDQKNY VRSKRQNDLE  240
FREAGSVL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.12e-27FAR1 family protein