PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028078291.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family FAR1
Protein Properties Length: 225aa    MW: 26274.3 Da    PI: 10.2104
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028078291.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR125.35e-0859143888
            FAR1   8 kevGFsvrkskskkskrngeitkrtfvCskegkreeekkk....tekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHe 88 
                     k+ GF + +++s +    + + + ++vC+++gk ++++k     ++++ r + +++++C   lk kk + ++ w+++ +   HnH+
  XP_028078291.1  59 KKNGFVIIVKYSDSG-GGRWTPRIKLVCKRSGKYRQKNKVkvysHDENARMTGTKKCDCPFLLKGKKLStNNDWMLHVVFGVHNHP 143
                     678999988887665.55667789*********9998887787666677777788888888888888778***************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 225 aa     Download sequence    
MDESDNHDNI LKQPIKDENS ILKNVEHAEC VLNYTSEFTT YEIFKSRETM IDWARDVGKK  60
NGFVIIVKYS DSGGGRWTPR IKLVCKRSGK YRQKNKVKVY SHDENARMTG TKKCDCPFLL  120
KGKKLSTNND WMLHVVFGVH NHPATDHLKG HSYLGRLSHQ EYELLVDMSK SMLRPKDILV  180
TLKQRNPLNI TTMKTIYNVR HRFKVKEKAR RSQMQQLLGK LAEHE