PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028078392.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family C2H2
Protein Properties Length: 246aa    MW: 26659.8 Da    PI: 6.6283
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028078392.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.20.0002690112123
                     EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                     ++C++C + F ++  L  H++ H
  XP_028078392.1  90 FSCNYCRRKFYSSQALGGHQNAH 112
                     89*****************9988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 246 aa     Download sequence    
MKRSSFNLES EDESEVSSQE ISPDPSKDST ATSSCLTNPI NAPQLPDAQP ISLDLTLHLN  60
ASDTELKGIP DTNNELAAPA HAPAALPRVF SCNYCRRKFY SSQALGGHQN AHKRERTMAK  120
RAMRLGVLSD RYASLASLPL HGSAFRSLGM EAHASMHQRM LPSSARPPLP EARGGARFEQ  180
GYFGLPVFVE DDDAELFWPG SFRQIGDGVT SNMGFNSGQS SNINFVAVAP APRTDRSSSP  240
DLTLKL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66140.14e-49C2H2 family protein