PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028078415.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 502aa MW: 58428.2 Da PI: 7.7559

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028078415.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	45.3	2.8e-14	37	123	2	91
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 fY +YAk+ GF + +++ ++ge + C++ r+++++ + +++ +++ +Ckakl+ +++kdg++++t+++leH+H+l+p XP_028078415.1 37 FYAKYAKHFGFAIAYGTQNFG-NDGELKYFGIECTRARMRRKRSEV--NPLEPSLSSKNDCKAKLRGSLQKDGTYKLTTVVLEHTHDLVP 123 9*************98887.9999**********999876..9999*********************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 502 aa Download sequence
MEGSNNPSQE VEEPESGEVE EPKQGMRFTP KQEVYAFYAK YAKHFGFAIA YGTQNFGNDG 60 ELKYFGIECT RARMRRKRSE VNPLEPSLSS KNDCKAKLRG SLQKDGTYKL TTVVLEHTHD 120 LVPSDSWHFA MNKRILTPVK RRLEINDEAG IGVARNFHSM VVEAGGFEAL TFDERDARNH 180 IDKARRLRLG VGDAESVAFY FHRMQQQNSN FYSEMDFDGE GRLRNLFWAD ARSRAAYNAF 240 GDVVTFDTTY LTNKYDMPFA PAWLSCMSDT PPNAIITDQC KAMQNAIQVV FPQARHRWCL 300 WHIMKKIPEK LRAYSEYESI KFALQKAVYE SFTKNEFDEE WQAMIEKFGL HDNDWLGGFY 360 DERHRWIPAY VKDMFWASMS TTQRSESMNA FFDGYVNSKT TLKQFVEQYD NALRSKVEKE 420 AKADFKSRNK LYDCLTMYAF EKQFRAAYTN AKFKEVQVEM KRLLYCRATL VEEKGSICTY 480 HVKEAIPVGE QMKKVEFVVY CT

Sequence ? help Back to Top

Protein Sequence Length: 502 aa Download sequence

MEGSNNPSQE VEEPESGEVE EPKQGMRFTP KQEVYAFYAK YAKHFGFAIA YGTQNFGNDG  60
ELKYFGIECT RARMRRKRSE VNPLEPSLSS KNDCKAKLRG SLQKDGTYKL TTVVLEHTHD  120
LVPSDSWHFA MNKRILTPVK RRLEINDEAG IGVARNFHSM VVEAGGFEAL TFDERDARNH  180
IDKARRLRLG VGDAESVAFY FHRMQQQNSN FYSEMDFDGE GRLRNLFWAD ARSRAAYNAF  240
GDVVTFDTTY LTNKYDMPFA PAWLSCMSDT PPNAIITDQC KAMQNAIQVV FPQARHRWCL  300
WHIMKKIPEK LRAYSEYESI KFALQKAVYE SFTKNEFDEE WQAMIEKFGL HDNDWLGGFY  360
DERHRWIPAY VKDMFWASMS TTQRSESMNA FFDGYVNSKT TLKQFVEQYD NALRSKVEKE  420
AKADFKSRNK LYDCLTMYAF EKQFRAAYTN AKFKEVQVEM KRLLYCRATL VEEKGSICTY  480
HVKEAIPVGE QMKKVEFVVY CT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	3e-85	FAR1 family protein