PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028078422.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family NAC
Protein Properties Length: 330aa    MW: 37974.3 Da    PI: 6.2736
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028078422.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM1531.4e-47241603128
             NAM   3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratk..sgyWkatgkdkevlsk 95 
                     pGfrFhPtd elv +yL++kve+++l++ e ik+vdiyk++PwdLpk  + ++kewyfF+kr +ky+++ r+nr+t   sg+Wkatg d++++s 
  XP_028078422.1  24 PGFRFHPTDGELVGFYLRRKVEKRPLRI-ELIKQVDIYKYDPWDLPKGGNVRDKEWYFFCKRGRKYRNSIRPNRVTGsgSGFWKATGIDRPIYSI 117
                     9***************************.89***************8878899*********************98866889***********99 PP

             NAM  96 ..........kgelvglkktLvfykgrapkgektdWvmheyrl 128
                               ++e +glkk+Lv+y+g+a kg+ktdW+mhe+rl
  XP_028078422.1 118 dtgagaseqdRSECIGLKKSLVYYRGSAGKGTKTDWMMHEFRL 160
                     77777665555555***************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 330 aa     Download sequence    
MEVEKMSEMN SARKDDDDDD VPLPGFRFHP TDGELVGFYL RRKVEKRPLR IELIKQVDIY  60
KYDPWDLPKG GNVRDKEWYF FCKRGRKYRN SIRPNRVTGS GSGFWKATGI DRPIYSIDTG  120
AGASEQDRSE CIGLKKSLVY YRGSAGKGTK TDWMMHEFRL PADHDDKSTK HMELDVKTIP  180
QEAEVWTLCR IFKRNVSYRK CIPDWRELSA KRNPASSKAC STTVDESDSN EDFISFGGAP  240
QGIRQNEKKQ FINDHVDETN LMVVDQLSYV SQSQVQAQAS STTTASYSSF LSPDAANNFV  300
KYEDWDELRS VVEFAVDPYI NNHYNDNNNM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G43000.12e-80NAC family protein