PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028078478.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

E2F/DP

Protein Properties

Length: 433aa MW: 48147.6 Da PI: 5.3481

Description

E2F/DP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028078478.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	E2F_TDP	78.4	6.5e-25	164	229	1	71
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneirwkg 71 r+++sL+llt+kf++l++++++g+++ln+ a+ L +v ++RRiYDi+NVLe+++l+ek++kn+ir kg XP_028078478.1 164 RYDSSLGLLTKKFISLIQEAKDGTLDLNKTADVL---EV--QKRRIYDITNVLEGIGLLEKTAKNHIRLKG 229 6899****************************...99..*************************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 433 aa Download sequence
MEISDEDRNR TLEQSLSQIQ LQSHSHSHSQ NHRSSFPSPS NRSFPPPPSH FRRPLPFAFI 60 PPPNDSNRSS SSSAATSTDF QTTDTSFAFS KFPQTNEIGN CKAKTSRLAT IEGRNEADLV 120 NNTLLGPETC TGGKRYGKPK VARHGTQGSN ADPPDGLNAV SGCRYDSSLG LLTKKFISLI 180 QEAKDGTLDL NKTADVLEVQ KRRIYDITNV LEGIGLLEKT AKNHIRLKGF GMMAPGEVDD 240 QFTTLKAEVE SLYDEEYRLD DCIREKLELL RTVECNENCQ KYLYLTEEDI MSVPCFKNKT 300 LIAIKAPRAS TVEVPDPDED ISFPQRQFRL VVRSSTGPID LYLLSKNGGQ DEDVTVKQVN 360 STDSRSSGGG RHTNLSLDHQ NNLKMAPDTL SPIGSKVSGI QKIVPSDCDV DDDYWFRPDH 420 EVSAIDLWGM EYP

Sequence ? help Back to Top

Protein Sequence Length: 433 aa Download sequence

MEISDEDRNR TLEQSLSQIQ LQSHSHSHSQ NHRSSFPSPS NRSFPPPPSH FRRPLPFAFI  60
PPPNDSNRSS SSSAATSTDF QTTDTSFAFS KFPQTNEIGN CKAKTSRLAT IEGRNEADLV  120
NNTLLGPETC TGGKRYGKPK VARHGTQGSN ADPPDGLNAV SGCRYDSSLG LLTKKFISLI  180
QEAKDGTLDL NKTADVLEVQ KRRIYDITNV LEGIGLLEKT AKNHIRLKGF GMMAPGEVDD  240
QFTTLKAEVE SLYDEEYRLD DCIREKLELL RTVECNENCQ KYLYLTEEDI MSVPCFKNKT  300
LIAIKAPRAS TVEVPDPDED ISFPQRQFRL VVRSSTGPID LYLLSKNGGQ DEDVTVKQVN  360
STDSRSSGGG RHTNLSLDHQ NNLKMAPDTL SPIGSKVSGI QKIVPSDCDV DDDYWFRPDH  420
EVSAIDLWGM EYP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G47870.1	3e-94	E2F/DP family protein