PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028078605.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family FAR1
Protein Properties Length: 315aa    MW: 36047.6 Da    PI: 7.9816
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028078605.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR148.13.7e-1549134290
            FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 
                     fY +YAk++GF +  ++++ +  +ge++     C++   r+++ +   +  +++ +++++Cka+++ ++++dg++++t+++leH+H+l+
  XP_028078605.1  49 FYAQYAKHCGFAIAFRSQNLT-SDGEVKYFGIECTRARLRTKRLEI--NPLEPSLSSKIDCKARVRASLQNDGRYKLTTVVLEHTHDLV 134
                     9*************9998887.8999****************9988..8999***********************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 315 aa     Download sequence    
MDIDSNNNSL NGSEEFEEQD NNLDINEIGE VKKPKKGMYF SSKQEVYAFY AQYAKHCGFA  60
IAFRSQNLTS DGEVKYFGIE CTRARLRTKR LEINPLEPSL SSKIDCKARV RASLQNDGRY  120
KLTTVVLEHT HDLVHTDSRY FAMNKRIRTP VKRRLEVNDA AGIGVARNFH SIVVEAGGYE  180
ALTFDERDAR NYIENARRLR LGLGDAKSVT LYFHKMQQKN SNFYSAIDLD EDGRMQNLFW  240
AATRSRAAYK AFGDVVSFDT TYLTNKYDMP FAPFVGVNHR GQSILFGCGL LSNENTEIFM  300
WLFKEWLDIV GAHGM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.11e-53FAR1 family protein