PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028078710.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family ERF
Protein Properties Length: 259aa    MW: 28869.3 Da    PI: 6.8078
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028078710.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP264.52.2e-20104154155
             AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                     ++++GVr+++ +grW+AeIrdp+    r kr++lg+f+t+eeAa  +++a+  l+g
  XP_028078710.1 104 KKFRGVRQRP-WGRWAAEIRDPT----RrKRVWLGTFDTPEEAATVYDRAAVTLKG 154
                     59********.**********84....34**********************99887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 259 aa     Download sequence    
MSTRSITKFS EHVVTETRSI HGHISTTSGV SSPVFRPKVV RIILTDADAT DSSSDDEPQV  60
VKRVKRHIRE INFKQSPKSV ANPSSKKRSH RTIRSPESDV TRRKKFRGVR QRPWGRWAAE  120
IRDPTRRKRV WLGTFDTPEE AATVYDRAAV TLKGPDAVTN FPKEPVTETA VDVKTDGEGL  180
LKVAAASSPT SVLRHEEFTP FDDFSYGDVD VFGFGFGFGF DTDIPLSLPD FALSDDFVGD  240
DFLGDKFNVD DFLVDGVVC
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
18690KKRSH
286105KKRSHRTIRSPESDVTRRKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G27950.14e-36ERF family protein