PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028078916.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

bHLH

Protein Properties

Length: 329aa MW: 36850.4 Da PI: 5.1652

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028078916.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	44.2	3.4e-14	148	194	3	54
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 ++h +Er+RR+++N+++ L l+P + kK++Ka+iL A++YIk+L XP_028078916.1 148 KNHVVAERKRREKLNQKLIALSALIPGL-----KKMDKASILVDATNYIKQL 194 7899**********************.....9***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 329 aa Download sequence
MDAFPAGWLY DLGMEDQYDI SIDEFDFQSF SPESYKSSLN STELEQLDTN IWNTSRATEN 60 IAPNESSTPP YLLSFAQSDS PSAHSAEQFN ENPSRSEKPK DHEMVPEENT NLSYLSSHGS 120 DDNSSDTLER RKWTKSVRAF SRPPLQAKNH VVAERKRREK LNQKLIALSA LIPGLKKMDK 180 ASILVDATNY IKQLGERVQT LEREAKKIIL VEPTKPSVKR FRLSSTDING TCLSDDNIDG 240 NSNNINQSPE IEARVSDKHV LVRIHCKKQD GLIAKILSEL DKFCLDVISS STMPFGDTAL 300 DITIIAQMGD ELKVKDLVKN LSSAVLKSV

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	154	159	ERKRRE
2	155	160	RKRREK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G22770.1	5e-42	bHLH family protein