PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028079093.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family NAC
Protein Properties Length: 212aa    MW: 24730.5 Da    PI: 8.0147
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028079093.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM805.3e-25551771128
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykve.PwdLp.kkvka.eekewyfFskrdkkyatgkrknratksgyWkatgkdkev 92 
                     lp G+rF+P d+elvv+yLkkk+ +++l++ ++i+++d+y+++ P +Lp +++k   ++ewyfF++r+ ++        a + g W +  +d++v
  XP_028079093.1  55 LPSGYRFSPLDSELVVHYLKKKILNQELPA-NIITTIDVYSYDfPDQLPlSEFKYgLTNEWYFFTTRSPHN-----LLLASNGGGWIEL-SDETV 142
                     699***************************.89********977*****7555541456*******98864.....345778999*987.56888 PP

             NAM  93 lskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                     l+ ++e+vg k+ L+fy ++  +  ktdW++ eyr+
  XP_028079093.1 143 LD-NDEVVGYKRRLAFYFAKPLQEMKTDWFIYEYRV 177
                     88.899***********99*99************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 212 aa     Download sequence    
MIVYFFYCIK AHTSSSSTSV FCIVSSISLS TMDKEYSSPT LYEINVDQNG KQLILPSGYR  60
FSPLDSELVV HYLKKKILNQ ELPANIITTI DVYSYDFPDQ LPLSEFKYGL TNEWYFFTTR  120
SPHNLLLASN GGGWIELSDE TVLDNDEVVG YKRRLAFYFA KPLQEMKTDW FIYEYRVNLT  180
SFALMNFLTT PLKRRYQALW CVKFVTKRKI LA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G61110.11e-24NAC family protein