PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028079140.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family NAC
Protein Properties Length: 307aa    MW: 34498.6 Da    PI: 7.2214
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028079140.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM107.81.3e-33602001128
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkklelee....vikevd....iykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratk......sg 81 
                     lp+G++F+P+d+e++ e+L++kv+++ ++++     +i+++d    i++++P++Lp  v++  +  +fF+  +k+y+tg+rk+r+++      + 
  XP_028079140.1  60 LPAGVKFDPSDQEIL-EHLEAKVSSNAHKIHPlideFIPTIDgengICYTHPEKLPG-VSKVGQIRHFFHWPSKAYTTGTRKRRKVHtnedggET 152
                     799***********9.99*******995553333443444434445**********4.44445677******************74444665577 PP

             NAM  82 yWkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128
                     +W++tgk+++vl+ +g+++g kk+Lv+y   gr++k+ekt+Wvmh+y+l
  XP_028079140.1 153 RWHKTGKTRPVLV-GGTVKGFKKILVLYtnYGRQRKPEKTNWVMHQYHL 200
                     8************.99************66589**************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 307 aa     Download sequence    
MTWHNDSEDE TAIQIVSPSP QQNRVIDAEK AGEVRFITCP SCGHNIELQN RAGIQDLPGL  60
PAGVKFDPSD QEILEHLEAK VSSNAHKIHP LIDEFIPTID GENGICYTHP EKLPGVSKVG  120
QIRHFFHWPS KAYTTGTRKR RKVHTNEDGG ETRWHKTGKT RPVLVGGTVK GFKKILVLYT  180
NYGRQRKPEK TNWVMHQYHL GNNEEERDGE VVISKVFYQT QPRQCGSTSS LSDSVFDQKS  240
SHVIENTQGY VEGYYNPTTL ISYDIGFGGQ NREITPQLIP NLGIQGDGSS FIHLPNNASK  300
VKVLERE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G28500.11e-121NAC family protein